Contributing

For softwares, this project is really a proxy for nixpkgs so any update should happen there ! This could be newer software versions, or new software for Sarek. Once it has been merged, please open a pull request with the changes.

Databases are managed by datalad, meaning each dataset has its own git repository. The central hub for those is dgenomes. If updates are too slow for you, please open a pull request there. If databases are missing, please open a pull request.

This project is only for germline analysis. We are open to improve it to add somatic analysis too.